PocilloporaBase: Pocillopora Transcriptomics Database
About PocilloporaBase
    Learn about how the tools in the this database were developed, and get information about developing a related species-specific database.
    Use BLAST to identify Pocillopora contig sequences with sequence similarity to a query   (results are linked to gene ontology data).
Contig Search
    Search for details about the transcriptomic contigs.
Gene Ontology Search
    Search genes predicted by Gene Ontology for Pocillopora.
Kegg Pathway Search
    Search for kegg pathways found in Pocillopora.
Pfam Protein Family Classification
    Search for Protein Family motifs in the transcriptome of Pocillopora.
Download Sequences Used in this Database
    Links to files containing all the sequences used in creating this transcriptome database.
Genetic Stock Search
    Search for known populations or phenotypes of Pocillopora. Or  Email us to add data/stocks to the database.
  Pocillopora in the Latest Literature  
  Szabó M, Wangpraseurt D, Tamburic B, Larkum AW, Schreiber U, Suggett DJ, Kühl M, Ralph PJ. Effective light absorption and absolute electron transport rates in the coral Pocillopora damicornis. Plant Physiol Biochem. 2014 Jul 25;83C:159-167. PMID: 25146689

Sawall Y, Al-Sofyani A, Banguera-Hinestroza E, Voolstra CR. Spatio-Temporal Analyses of Symbiodinium Physiology of the Coral Pocillopora verrucosa along Large-Scale Nutrient and Temperature Gradients in the Red Sea. PLoS One. 2014;9(8):e103179. PMID: 25137123

Comeau S, Carpenter RC, Nojiri Y, Putnam HM, Sakai K, Edmunds PJ. Pacific-wide contrast highlights resistance of reef calcifiers to ocean acidification. Proc Biol Sci. 2014 Sep 7;281(1790). PMID: 25056628

Gilis M, Meibom A, Domart-Coulon I, Grauby O, Stolarski J, Baronnet A. Biomineralization in newly settled recruits of the scleractinian coral Pocillopora damicornis. J Morphol. 2014 Jun 25;. PMID: 24966116

Pisapia C, Pratchett MS. Spatial variation in background mortality among dominant coral taxa on Australia's Great Barrier Reef. PLoS One. 2014;9(6):e100969. PMID: 24959921

Toh TC, Ng CS, Peh JW, Toh KB, Chou LM. Augmenting the post-transplantation growth and survivorship of juvenile scleractinian corals via nutritional enhancement. PLoS One. 2014;9(6):e98529. PMID: 24896085