PocilloporaBase: Pocillopora Transcriptomics Database
About PocilloporaBase
    Learn about how the tools in the this database were developed, and get information about developing a related species-specific database.
    Use BLAST to identify Pocillopora contig sequences with sequence similarity to a query   (results are linked to gene ontology data).
Contig Search
    Search for details about the transcriptomic contigs.
Gene Ontology Search
    Search genes predicted by Gene Ontology for Pocillopora.
Kegg Pathway Search
    Search for kegg pathways found in Pocillopora.
Pfam Protein Family Classification
    Search for Protein Family motifs in the transcriptome of Pocillopora.
Download Sequences Used in this Database
    Links to files containing all the sequences used in creating this transcriptome database.
Genetic Stock Search
    Search for known populations or phenotypes of Pocillopora. Or  Email us to add data/stocks to the database.
  Pocillopora in the Latest Literature  
  Rougée LR, Richmond RH, Collier AC. Molecular reproductive characteristics of the reef coral Pocillopora damicornis. Comp Biochem Physiol A Mol Integr Physiol. 2015 Jul 28;. PMID: 26231839

Morri C, Montefalcone M, Lasagna R, Gatti G, Rovere A, Parravicini V, Baldelli G, Colantoni P, Bianchi CN. Through bleaching and tsunami: Coral reef recovery in the Maldives. Mar Pollut Bull. 2015 Jul 27;. PMID: 26228070

Gilis M, Meibom A, Alexander D, Grauby O, Stolarski J, Baronnet A. Morphology, microstructure, crystallography, and chemistry of distinct CaCO3 deposits formed by early recruits of the scleractinian coral Pocillopora damicornis. J Morphol. 2015 Jul 21;. PMID: 26193820

Feuillassier L, Masanet P, Romans P, Barthélémy D, Engelmann F. Towards a vitrification-based cryopreservation protocol for the coral Pocillopora damicornis L.: Tolerance of tissue balls to 4.5M cryoprotectant solutions. Cryobiology. 2015 Jul 16;. PMID: 26188079

Leray M, Meyer CP, Mills SC. Metabarcoding dietary analysis of coral dwelling predatory fish demonstrates the minor contribution of coral mutualists to their highly partitioned, generalist diet. PeerJ. 2015;3:e1047. PMID: 26137428

Tout J, Siboni N, Messer LF, Garren M, Stocker R, Webster NS, Ralph PJ, Seymour JR. Increased seawater temperature increases the abundance and alters the structure of natural Vibrio populations associated with the coral Pocillopora damicornis. Front Microbiol. 2015;6:432. PMID: 26042096