PocilloporaBase: Pocillopora Transcriptomics Database
About PocilloporaBase
    Learn about how the tools in the this database were developed, and get information about developing a related species-specific database.
    Use BLAST to identify Pocillopora contig sequences with sequence similarity to a query   (results are linked to gene ontology data).
Contig Search
    Search for details about the transcriptomic contigs.
Gene Ontology Search
    Search genes predicted by Gene Ontology for Pocillopora.
Kegg Pathway Search
    Search for kegg pathways found in Pocillopora.
Pfam Protein Family Classification
    Search for Protein Family motifs in the transcriptome of Pocillopora.
Download Sequences Used in this Database
    Links to files containing all the sequences used in creating this transcriptome database.
Genetic Stock Search
    Search for known populations or phenotypes of Pocillopora. Or  Email us to add data/stocks to the database.
  Pocillopora in the Latest Literature  
  Wilkinson SP, Fisher PL, van Oppen MJ, Davy SK. Intra-genomic variation in symbiotic dinoflagellates: recent divergence or recombination between lineages? BMC Evol Biol. 2015 Dec;15(1):325. PMID: 25776334

Ross CL, Falter JL, Schoepf V, McCulloch MT. Perennial growth of hermatypic corals at Rottnest Island, Western Australia (32°S). PeerJ. 2015;3:e781. PMID: 25755921

Sawall Y, Al-Sofyani A, Hohn S, Banguera-Hinestroza E, Voolstra CR, Wahl M. Extensive phenotypic plasticity of a Red Sea coral over a strong latitudinal temperature gradient suggests limited acclimatization potential to warming. Sci Rep. 2015 Mar 10;5:8940. PMID: 25754672

Strahl J, Stolz I, Uthicke S, Vogel N, Noonan SH, Fabricius KE. Physiological and ecological performance differs in four coral taxa at a volcanic carbon dioxide seep. Comp Biochem Physiol A Mol Integr Physiol. 2015 Feb 26;. PMID: 25727938

Asahina AY, Hadfield MG. Draft Genome Sequence of Pseudoalteromonas luteoviolacea HI1, Determined Using Roche 454 and PacBio Single-Molecule Real-Time Hybrid Sequencing. Genome Announc. 2015 Feb 19;3(1). PMID: 25700414

Browne NK, Tay JK, Low J, Larson O, Todd PA. Fluctuations in coral health of four common inshore reef corals in response to seasonal and anthropogenic changes in water quality. Mar Environ Res. 2015 Apr;105:39-52. PMID: 25682391