PocilloporaBase: Pocillopora Transcriptomics Database
About PocilloporaBase
    Learn about how the tools in the this database were developed, and get information about developing a related species-specific database.
    Use BLAST to identify Pocillopora contig sequences with sequence similarity to a query   (results are linked to gene ontology data).
Contig Search
    Search for details about the transcriptomic contigs.
Gene Ontology Search
    Search genes predicted by Gene Ontology for Pocillopora.
Kegg Pathway Search
    Search for kegg pathways found in Pocillopora.
Pfam Protein Family Classification
    Search for Protein Family motifs in the transcriptome of Pocillopora.
Download Sequences Used in this Database
    Links to files containing all the sequences used in creating this transcriptome database.
Genetic Stock Search
    Search for known populations or phenotypes of Pocillopora. Or  Email us to add data/stocks to the database.
  Pocillopora in the Latest Literature  
  Kegler P, Baum G, Indriana LF, Wild C, Kunzmann A. Physiological Response of the Hard Coral Pocillopora verrucosa from Lombok, Indonesia, to Two Common Pollutants in Combination with High Temperature. PLoS One. 2015;10(11):e0142744. PMID: 26555818

Coker DJ, Hoey AS, Wilson SK, Depczynski M, Graham NA, Hobbs JP, Holmes TH, Pratchett MS. Habitat Selectivity and Reliance on Live Corals for Indo-Pacific Hawkfishes (Family: Cirrhitidae). PLoS One. 2015;10(11):e0138136. PMID: 26529406

Adjeroud M, Mauguit Q, Penin L. The size-structure of corals with contrasting life-histories: A multi-scale analysis across environmental conditions. Mar Environ Res. 2015 Dec;112(Pt A):131-9. PMID: 26525871

Marchini C, Airi V, Fontana R, Tortorelli G, Rocchi M, Falini G, Levy O, Dubinsky Z, Goffredo S. Annual Reproductive Cycle and Unusual Embryogenesis of a Temperate Coral in the Mediterranean Sea. PLoS One. 2015;10(10):e0141162. PMID: 26513159

Hoogenboom M, Rottier C, Sikorski S, Ferrier-Pagès C. Among-species variation in the energy budgets of reef-building corals: scaling from coral polyps to communities. J Exp Biol. 2015 Oct 20;. PMID: 26486359

Rodríguez-Villalobos JC, Work TM, Calderon-Aguilera LE, Reyes-Bonilla H, Hernández L. Explained and unexplained tissue loss in corals from the Tropical Eastern Pacific. Dis Aquat Organ. 2015 Oct 16;116(2):121-31. PMID: 26480915