PocilloporaBase: Pocillopora Transcriptomics Database
About PocilloporaBase
    Learn about how the tools in the this database were developed, and get information about developing a related species-specific database.
    Use BLAST to identify Pocillopora contig sequences with sequence similarity to a query   (results are linked to gene ontology data).
Contig Search
    Search for details about the transcriptomic contigs.
Gene Ontology Search
    Search genes predicted by Gene Ontology for Pocillopora.
Kegg Pathway Search
    Search for kegg pathways found in Pocillopora.
Pfam Protein Family Classification
    Search for Protein Family motifs in the transcriptome of Pocillopora.
Download Sequences Used in this Database
    Links to files containing all the sequences used in creating this transcriptome database.
Genetic Stock Search
    Search for known populations or phenotypes of Pocillopora. Or  Email us to add data/stocks to the database.
  Pocillopora in the Latest Literature  
  H├ędouin LS, Wolf RE, Phillips J, Gates RD. Improving the ecological relevance of toxicity tests on scleractinian corals: Influence of season, life stage, and seawater temperature. Environ Pollut. 2016 Feb 19;213:240-253. PMID: 26907701

Gardner SG, Nielsen DA, Laczka O, Shimmon R, Beltran VH, Ralph PJ, Petrou K. Dimethylsulfoniopropionate, superoxide dismutase and glutathione as stress response indicators in three corals under short-term hyposalinity stress. Proc Biol Sci. 2016 Feb 10;283(1824). PMID: 26865302

Zhou J, Fan TY, Beardall J, Gao K. Incident Ultraviolet Irradiances Influence Physiology, Development and Settlement of Larva in the Coral Pocillopora damicornis. Photochem Photobiol. 2016 Jan 20;. PMID: 26790638

Ziegler M, Roik A, Porter A, Zubier K, Mudarris MS, Ormond R, Voolstra CR. Coral microbial community dynamics in response to anthropogenic impacts near a major city in the central Red Sea. Mar Pollut Bull. 2016 Jan 4;. PMID: 26763316

Rinkevich B, Shaish L, Douek J, Ben-Shlomo R. Venturing in coral larval chimerism: a compact functional domain with fostered genotypic diversity. Sci Rep. 2016 Jan 13;6:19493. PMID: 26758405

Hoadley KD, Pettay DT, Grottoli AG, Cai WJ, Melman TF, Schoepf V, Hu X, Li Q, Xu H, Wang Y, Matsui Y, Baumann JH, Warner ME. Physiological response to elevated temperature and pCO2 varies across four Pacific coral species: Understanding the unique host+symbiont response. Sci Rep. 2015 Dec 16;5:18371. PMID: 26670946