PocilloporaBase: Pocillopora Transcriptomics Database
About PocilloporaBase
    Learn about how the tools in the this database were developed, and get information about developing a related species-specific database.
    Use BLAST to identify Pocillopora contig sequences with sequence similarity to a query   (results are linked to gene ontology data).
Contig Search
    Search for details about the transcriptomic contigs.
Gene Ontology Search
    Search genes predicted by Gene Ontology for Pocillopora.
Kegg Pathway Search
    Search for kegg pathways found in Pocillopora.
Pfam Protein Family Classification
    Search for Protein Family motifs in the transcriptome of Pocillopora.
Download Sequences Used in this Database
    Links to files containing all the sequences used in creating this transcriptome database.
Genetic Stock Search
    Search for known populations or phenotypes of Pocillopora. Or  Email us to add data/stocks to the database.
  Pocillopora in the Latest Literature  
  Wahl M, Al Sofyani A, Saha M, Kruse I, Lenz M, Sawall Y. Large Scale Patterns of Antimicrofouling Defenses in the Hard Coral Pocillopora verrucosa in an Environmental Gradient along the Saudi Arabian Coast of the Red Sea. PLoS One. 2014;9(12):e106573. PMID: 25485603

Schrameyer V, Wangpraseurt D, Hill R, Kühl M, Larkum AW, Ralph PJ. Light respiratory processes and gross photosynthesis in two scleractinian corals. PLoS One. 2014;9(10):e110814. PMID: 25360746

Mayfield AB, Wang YB, Chen CS, Lin CY, Chen SH. Compartment-specific transcriptomics in a reef-building coral exposed to elevated temperatures. Mol Ecol. 2014 Dec;23(23):5816-30. PMID: 25354956

Sogin EM, Anderson P, Williams P, Chen CS, Gates RD. Application of 1H-NMR metabolomic profiling for reef-building corals. PLoS One. 2014;9(10):e111274. PMID: 25354140

Crowder CM, Liang WL, Weis VM, Fan TY. Elevated temperature alters the lunar timing of Planulation in the brooding coral Pocillopora damicornis. PLoS One. 2014;9(10):e107906. PMID: 25329546

McKeon CS, Moore JM. Species and size diversity in protective services offered by coral guard-crabs. PeerJ. 2014;2:e574. PMID: 25289176