PocilloporaBase: Pocillopora Transcriptomics Database

Sources of Data and Research

Information about projects that lead to data that has been contributed to this site.
We will try to keep all the projects up to date here with links to datasets whenever available.

Data Lab Researcher Stress Condition(s) Associated Publications Collection Date Collection Location Sequencing Platform
Reference Transcriptome v1.0 Finnerty (BU) Traylor-Knowles Multiple Pooled Samples
  • Heat Shock
  • Hypo-Salinity
  • Desiccation
  • Peroxide Exposure
  • Control (All Three Locations)
Traylor-Knowles, N., Granger, B. R., Lubinski, T. J., Parikh, J. R., Garamszegi, S., Xia, Y., Marto, J. a, et al. (2011). Production of a reference transcriptome and transcriptomic database (PocilloporaBase) for the cauliflower coral, Pocillopora damicornis. BMC genomics, 12(1), 585. BioMed Central Ltd. doi:10.1186/1471-2164-12-585 2009 Hawaii
Coconut Island: 21° 25' 00.98" N; 157° 44' 50.86" W
Waimanalo Bay: 21° 20' 42.41" N; 157° 41' 38.00" W
Sand Island: 21° 19' 28.78" N; 157° 53' 30.04" W
454 Beckman Coulter